Getting and setting sera sequence information

Getting and setting sera sequence information

srSequences(map, missing_value = ".")

srSequences(map) <- value

srNucleotideSequences(map, missing_value = ".")

srNucleotideSequences(map) <- value

Arguments

map

The acmap data object

missing_value

Character to use to fill in portions of the sequence matrix where sequence data is missing.

value

A character matrix of sequences with rows equal to the number of sera

Value

A character matrix of sequences with rows equal to the number of sera.

See also

Other antigen and sera attribute functions: agAttributes, agGroups(), agHomologousSr(), agLabIDs(), agSequences(), ptAnnotations, ptClades, srAttributes, srGroups(), srHomologousAgs()