Saves acmap coordinate data of all or specified antigens and sera to a .csv file.

save.coords(
  map,
  filename,
  optimization_number = 1,
  antigens = TRUE,
  sera = TRUE
)

Arguments

map

The acmap data object.

filename

Path to the file.

optimization_number

Optimization number from which to take coordinates

antigens

Antigens to include, either as a numeric vector of indices or character vector of names.

sera

Sera to include, either as a numeric vector of indices or character vector of names.

See also